Introductory Biology                                                                                                        September 2007

Online Test Link

Wiki

online essay test

Final exam Information

SMART TEAM
APPLICATION 2008-2009

VIII.Evolution

Evolution (PBS)

Evolution Wikipedia Entry

Charles Darwin (wikipedia Entry)

PIctorial of Charles Darwin

Happy Face Spiders

Hardy Weinberg Equilibrium

Hardy Weinberg Tutorial

Hardy Weinberg Problems

Another Tutorial

VII. Genetics

Mendelian & other types of Genetics problems

Classical Genetics

Background and types of Inheritance

23 and me

Why so many errors?

Library Resource

Page

Cold Spring Harbor Genetic Disorders

VI. DNA Rplctn & Cell Div  Ch. 10, 8

DNA replicatn vid

DNA packing and DNA Rplctn Anim.

Biology Project: DNA & Mitosis

WIkipedia: Mitosis

Cells Alive:Mitosis

Meiosis Animation

Meiosis Animation

Meiosis Diagram

Comparison of Mitosis and Meiosis

V. Applied Molecular Biology

Restriction Enzymes

Restriction Enzyme Animation

Actual Plasmid Map

Gel Electrophresis

Gel Electrophresis Animation (utah) (this one is cute!)

Another Electrophoresis Animation

Restriction Enzymes MOM-PDB

IV-DNA Structure and Function

DNA Structure ppt

DNA Interactive

DNA Structure Review

Transciption Animation

Translation Animation

Eukaryotic Expression

Alternative Splicing ppt.

Transformation

Genetic Code Table

III-Cell

Energetics

Glycolysis Review Animation

Respiration

Tutorial Practice Problems

Citric Acid Cycle Tutorial

Electron Transport Chain Tutorial

Photosynthesis Tutorial Project

Photosynthesis

Tutorial Project II

JK's Photosynthesis Animation

VIrtual Cell Animation of Photosynthesis

Rubisco (MOM)

Photosynthesis Text and Diagrams (PH)

II-Cell Structure

Cell ppt

Membrane Dynamics ppt

Osmosis Lab ppt

Cell Biology Animations

CellsAlive

I- Biochemistry   

Chapter 2 pwrpt.

Chapter 3 ppt.

Protein Structure Tutorial

The Biology Project: Biochemistry

The PDB

Protein Structure (Biology Project)

Wikipedia: Proteins

Amino Acid List

Genetics

Evolution

Taxonomy

Final Grade Calculator

Upper School  Calendar/Important Dates

 

 

 

Announcements:

Enjoy your summer!

Honors Chem Placement

will be announced after the exam towards the middle of June.

SMART Team selection will be announced this summer.

All final exams will be graded on Thinkwave.

Please log in and check your scores.

Remember I will not be here next week during office hours.

I will be in Belize!

I wil leave my exams in the upper school office for you to look at BUT you cannot take them.  Some students have not taken the exam  at this writing.

June 2008

2

Review Day

Part I of the final given in class

Taken with partners

Allowed to bring in your own review outlines

3

Final Exams

Biology Exam

Exam grades will be posted to thinkwave asap.

Please be advised that I will not be available for office hours next week to review the exam with you individually. Please make an appointment for the third week in june if you would like to see the exam.

4

Final Exams

Check thinkwave for your grades.

5

Final Exams

6

Make up Exams

7/8

Leaving for Belize on Sunday June 8 thru 14

 

Graduation sunday June 8

May 2008

28 test up

In class essays taken for genetics- see link above

29

TEst still up..staying up till tomorrow as per your request.

Planaria maintenance day...please work on your introduction for the planaria paper

30

As per your request- test stays up till tonight.

Lab on PV92

DNA Isolation

Bring lab notebook every day

1 Lab

PCR reactions

Review links under APPLIED MOLECULAR BIOLOGY to the left

2 Lab

Gel Electrophoresis

Gel images will be emailed and posted as a link.

3/4

Review gel images over the weekend

5

PV92 discussion

Homework Questions on Lab click here

PV92ppt

6  Quiz on Lab open notes!

Data analysis for Planaria

Bring your own computer or use the cart

Review procedure

 

7

Evolution

Introduction to evolution.

Clean out and organize notebooks.

Returned quizzes.

 

8

Charles Darwin

Natural Selection

Artificial Selection

Differential Selection

Orange Biozone

Read 95, do 96, 73

ppt on Darwin

9

Evidence for Evolution

Fossil Record

Biogeography

Comparitive Anatomy

Molecular Biology

ppt on Evidence for Evolution

Orange biozone75,76,

read 77,81,83,84,85

86

read 89

10/11 Mothers' Day

12

Examples of Evolution and Natural Selection

MRSA, tuberculosis, Antibiotic Resistance

Pesticide resistance

Planaria conclusion rough draft due. Last check before handing in paper.

13

Bean Lab

Population level evolution

population, gene pool, and microevolution

Hardy Weinberg Equilibrium

14

Lab in 1/2- please review data and think about graphing your data. We will discuss the data in class tomorrow.  Make sure you review the links above.

3/4, 5/6- Reviewed lab data and graphing question. Due monday

Bring Orange Biozone review links above.

15

Section 1/2- review lab data

Section3/4 & 5/6

Hardy Weinberg

Bring ORANGE BIOZONE

Complete 111-112 in  biozone

16

quiz on Evolution Vocabulary and the defination of evolution

Section 1/2: data discussion, and Hardy Weinberg

Section 3/4 other factors contributing to evolution (read 13.9)

Orange BZ- 116, 117, 118

Belize Parent/Student meeting 3:15 room 110

17/18

19

HW Equilibrium in real world

Other factors that cause microevolution: G. Drift, Gene flow, founder, and bottleneck

What is variation, types, and causes

13.9, 13.10, 13.11, 13.12, 13.14

Review BZ from last week carefully.

20

Natural Seletion Curves

13.16

BZ- Read 107, complete # 3 and 4 on 108, review 109 carefully- you do not have to complete the questions though you should know how to complete the questions.

Complete 98, 99, 100 #1, 2A,3,5

What is a species? What keeps species separate?

What causes speciation?

BZ-

Planaria paper due section 1/2

21

Section 1/2 HW  lab

3/4 5/6 What is a species? How are species kept separate?

Read 14.1- 14.8

BZ- 119,120,121,122,123

22

Quiz

Chapter 13 qand early 14- species and species barrier

23

Special Schedule

Planaria paper due 3/4 , 5/6

Pace of Evolution

 

Test online Chapter 13, 14, some of 15

24/25

26 No School

Memorial Day

27

Take home test on Evolution given on

Review Sheet I and II in class

Work on out YOUR OWN Outlines. See Exam guidelines

Senior Day and Yearbook

28

Take home test DUE. No exceptions

Review Sheet III and IV

Work on YOUR OWN outlines

See exams guidelines

Dissection

29

Review Sheets

Dissection

 

Work on your OWN outlines

 

 

Community Service Hours are due!

30

Review day

Bring Questions.

Review day is student driven- NOT teacher driven. You will have had time to construct outlines, practice mc, and complete review sheets. You will have had time to discern what topics are confusing and you should bring those questions to class today.

Plant labs are due.

Semester Ends

Work on Outlines!

Please review guidelines. The outlines should be your own work. NOT some one elses. Your own had writing is preferable. I will check and review the outlines.

June 2008

 

April 2008

31 Baby Pictures Due- in color from both partners

Change water in tanks

Other form of Inheritance BZ

211, 212, 214, 217

Check point sheet

5th period to Library for Baby Egg Presentation

1

Other types of inheritance

Incomplete Dominance

Codominance

Multiple Allele Inheritance

Sex linked inheritance

Sex Determination

Work on Biozone problems that are related to what we covered in class

 

2 End of interim

Types of Inheritance continued

 

Baby Egg!

3

Genetics Problems- work on in class and due Friday

 

Baby Egg!

4 Genetics Quiz

Genetics Problems due completed

Planaria Day!

We will test the powers of regeneration of the planaria.  This group will be separate from your ongoing experiment.

Baby Egg!

 

5/6

Baby Egg

7 SMART Team

to California

Change water for planaria

and check on regeneration ones! I suggest adding a little water to the regeneration tank.

Computer work on pamphlet in class- bring notes on your project (own lap tops welcome!)

8 SMART Team to California

Genetics- Movie Lorenzo's Oil Complete questions 1-5 for HW

9 SMART Team to California

Complete Lorenzo's Oil

Complete questions 6-10 for HW to hand on THURSDAY BEFORE field trip

10

Bodies Trip Leaving at 9am- report to first period

HW- review notes on Genetics problems before class on Friday.

11 Baby Egg Pamphlet DUE- NO exceptions!!!

Review Pamphelets

and last Genetics Quiz

Bring Genetics Packet to class

Introduction to Pedigree

HW: BZ: 228-229

HW : Pedigree construction BZ- 224- Construct a pedigree of a trait from 223

& pedigree worksheet

Practice pedigree problems

12/13

14

Pedigree Due

and Pedigee worksheet due

Dicussion of Genetic Testing? Familial History & Risk

 

Fill in sheet- Please work on tonight!

15

Prokaryotic Gene Annotation Workhop- Genomics Institute

Turn in Fill in Sheet to the substitute

You will be working on the online project below. Its an interesting story and related to genetics and pedigrees.

Romanovs Mystery

 

Chromosome mapping

Bring biozone to class

Read 9.21

 

16

Prokaryotic Gene Annotation Workhop- Genomics Institute]

Biozone 232,233 (skip genotype ratio in #3), 235, 238

In an email and with a partner, from class please email me the following answers. Please include examples where possible and please restate the question.

What is the definition for epistasis?

What is the definition for complementary genes?

What are the basic differences between polgeny, pleotropy, epistasis?

 

17

Prokaryotic Gene Annotation Workhop- Genomics Institute

Work on Computer genetics problems with the links below

Set 1

Set 2

Set 3

and work on Biozone

BZ-227,219,220 finish for HW if not completed in class.

18- School Closed Faculty Inservice 19/20 Passover

21

Planaria Monday! Think about your introduction for next Monday!

Fed 'em!

Some one left a dish out from period 5/6 and its on the side bench. Please take care of your planaria today!!!!

22

Linked Genes and unexpected ratios. (read 9.19 & 9.20)

Read BZ-221

What patterns should emerge when you are predicting linkage instead of mendelian inheritance? Compare offspring to parent cross in both sex linked and somatic inheritance.

23

Linked genes  & Crossing over

24

No classes for Form III

Cloisters Trip

Genetics Test up

Essays up

25

 

Short review problems and  essay questions

Genetics Test today.

26/27

In class essay on Monday!

Online test continues

March 2008

3

Essay Test

Online test continues

4

Bring copy of test to class

Planaria Project Begins- try to bring spring water to school

5

Last day to submit test

6

Honors Projects Due

Return the essays

Hand walking Video

7

Spring Break

begins after school

Change Planaria water with water from side bench.

Continue with Hand Walking Video

8/9

Spring Break

25

Genetics

Check plananaria- should you fee them? What should you feed them? record numbers

C&C- 154-159

BZ 206, 207, 209,210

26

Mendelian Genetics

Review and apply vocabulary given in class.

Review links above

27

28

Baby Picture Assigned

Genetics Questionaire given out- due tomorrow

Special Morning Meeting- All form III students to Faculty Lounge for History of Pingry

29

Going to Library

Genetic Disorders given out.

30

 

February 2008

Monday
Tuesday
Wednesday
Thursday
Friday
Sat./ Sun.

4

DNA Replication

Read 10.4

5

I am absent.

Read 10.5

Bring BIozone to class

6

Feedback quiz on Replication

Biozone to class

DNA replication

Review resource links above.

7

Finishing Plant Lab Data

Discussion of Formal Lab Write-up

8

Working on plant lab with excel. Bring lap tops and lab notebooks.

9/10

Work on Plant labs

11.

Brief discussion of plant labs- bring questions and comments everyday. Please work on at least one section every few days.

Introduction to Cell Cycle (Read: 8.1- 8.5)

HW FInd three chemotherapy drugs and the point in the cell cycle they work on.

12

Mitosis Discussion (8.6)

BZ: 100, 102, 103

Lab: Microscope observing Mitosis in onion cells

Cartoon Assignment- using a typical white piece of paper, represent the cell cycle in a colorful, creative representation, include all phases of mitosis

Cell Cycle ppt.

13

SNOW DAY!

14

Onion Root Tip Slide- Practicing ID of phases

Mtosis Observation Lab

15

Quiz! Open notes! 12 points

Cartoon due 10 points

16/17

18 

Presidents' Weekend

No School

19

Presidents' Weekend

No School

20

C&C: Read 8.13, 8.14, 8.17

Biozone: 181, 182, 183, 184

Meiosis ppt

21

C&C- 8.15-8.16

Plant Lab 1 Due (section 3/4, 5/6)

Review links above!

Practice Meiosis with beads!

Meiosis II ppt

HONORS PROJECTS OUT. Please see my office immediately to get pick up project and one model kit per partnership.

22

C&C 8.18-8.20

SNOW DAY!

23

25

Section 1/2 plant reports due

Read 8.21, 8.22

BZ-201, 202,203

26

Meiosis III ppt

Review notes, finish BZ

27

Bz pages- 169,170,171, 177-178

28

Most of essays are up! Essays will be Monday in class. Check link above.

PLANARIA DAY! Starting planaria project

29

In class open notes quiz on meiosis

Essay test on Monday

MC online Sunday -Wed nite. 2 submissions- count the average! Please print out the test and work carefully. See me if you have questions.

 

January 2008

Monday
Tuesday
Wednesday
Thursday
Friday
Sat./ Sun.
  1 2 3 4 5/6

7

Classes resume

Pea Lab

Review Links and animations above.

8

Pea Planting

Review Quiz

Sec 1/2- Planted and part of quiz for homework.

Sec 3/4- quiz for HW

Sec 5/6- review

Quiz doc

9

Eukaryotic Gene Hunting Ex.

Another quiz! Based on additional terms from Gene Hunting Ex from class.

10

Alum College Luncheon

Sec 1/2- review and extra credit question

Sec 3/4-review and extra credit question

Section 5/6- fill in and gene hunting page 2&4

Gene hunting doc.

Fill in review

11

Honors Project Out

Covered Alternative Splicing, and gene mutations

Review readings above in Chapter 10.  Busy week next week! Prepare this weekend!

12/13

14

Starter Plate

15

Transformation Lab

Essay are up!

16

Review Lab results

Work on essays

17

Review lab results

Work on essays

Online test

18

End of Semester

Online Test

Section 1/2- essay?

19/20

Online test

21

No School

MLK Day

22

Second Semester starts

 In class essay

23

Paper Plasmid Activity

Read 12.2 in C&C

Section 1/2- Completing HW questions and BZ 243-244

Section 3/4- Schematic Restriction  Map of your plasmid, BZ 243-244

24

Review links under Applied Molecular Biology Resources (top of page)

25 Career Day

Winter Sports Night

Gel Electrophoresis Discussion

BZ- 246

Test Corrections due! No exceptions please.

2627
28

29

Honors Project Due

Restriction Digest of pGlo

30

Restriction Digest of pGlo- gel electrophoresis

31

Analysis/Annotation of Gels

Your gels are in your email!

1

Quiz-Plasmid digest Quiz

9 points totals-you can use your lab notebooks.

1 point extra credit for showing me your annotated gel in your lab notebook. (1/2- due monday)

2/3

.

December 2007

Monday
Tuesday
Wednesday
Thursday
Friday

Dec 1/2    

3

4

5

Essays posted

Crickets and Peas Lab

6

Graphing Crickets and Peas Lab with Excel on laptops

7

No classes

Waksman Student Scholars Meeting Rutgers

8/9

Online test

(nite 1)

two submissions ONLY!

10

online test

(nite 2)

two submissions only!

IN CLASS ESSAY Test

11

Online test (nite 3)

two submissions

TOTAL!

12

Harvest of Fear

 

Honors Quiz goes up this evening!

13

SNOW DAY!

 

14      

Skipping end H of F

Introduction to DNA Structure

Read Chapter 10

BZ- 143-144 skip 4 & 5

see ppt above

see links above

Wiki Project 3 Assigned

15/16

Wiki Project 3

Chap. 10

17

Chap 10

DNA isolation Lab

Wiki Project 3

Completed

Test Corrections accepted

18

Chap 10

Section 3/4 picking up the drop.

Test corrections due

19

Chap 10

BZ-146,153,155

Due tomorrow

Please finish the model.

Honors quiz back up tonight for one more try!

20

Chap 10

BZ-157,158

Section 5/6 picking up the drop.

Middle School Swim Meet

21

Last Day!

Section 1/2 Dirty DNA Lab (and food!)

Section 3/4 & 5/6 cancelled but made up this week during drops

Leave your Biozone!

22/23

24 Christmas Eve

25 Christmas

 

26 27 28

29/30

 

 

 Texts:

1.Biozone Vol. 1&2

2. Concepts and Connections, Campbell, Mitchell, Reece. This is the student support site for this text. Excellent review help!

3. Biology Lab notebook

Required materials:

1. Large 3 ring binder                

2. College rule loose leaf          

3. Dividers  

Suggested: color pencils or markers, hole punch